Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 TSPY12P-201ENST00000421279 868 ntBASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 UPK3BP1-201ENST00000428678 509 ntBASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 TSSC2-201ENST00000450217 709 ntBASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 AC090616.6-201ENST00000582640 721 ntBASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 AC016734.2-201ENST00000624325 1377 ntBASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 AL096828.2-201ENST00000567259 1965 ntBASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRAM1L1Q8N609 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 CHCHD2P8-201ENST00000429873 447 ntBASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 GUSBP12-201ENST00000513727 720 ntBASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.97■□□□□ 0.47
TRAM1L1Q8N609 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 KRT18P65-201ENST00000439811 1286 ntBASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 AC009154.2-201ENST00000621177 724 ntBASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 BICD1-207ENST00000551848 1962 ntBASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 AC132938.6-201ENST00000623828 1655 ntBASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAM1L1Q8N609 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAM1L1Q8N609 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAM1L1Q8N609 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.95■□□□□ 0.46
TRAM1L1Q8N609 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms