Protein–RNA interactions for Protein: Q8N1L1

LINC00528, Putative uncharacterized protein encoded by LINC00528, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00528Q8N1L1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 AC018470.1-201ENST00000624790 3129 ntBASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 AL355578.1-201ENST00000607405 1328 ntBASIC12.11□□□□□ -0.47
LINC00528Q8N1L1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 PPP2R2DP1-201ENST00000420526 637 ntBASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 AL157702.2-201ENST00000428292 1223 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 WBP1LP6-201ENST00000438434 424 ntBASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 TSPY17P-201ENST00000450329 467 ntBASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 AL512353.2-201ENST00000448759 1962 ntBASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 AC131649.1-201ENST00000569215 1313 ntBASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
LINC00528Q8N1L1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 ATP6AP2-204ENST00000447485 1254 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 LINC01297-202ENST00000453395 624 ntTSL 5 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.09□□□□□ -0.47
LINC00528Q8N1L1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms