Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AC233702.3-201ENST00000578656 1387 ntBASIC19.74■□□□□ 0.75
VPS52Q8N1B4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 FP475955.4-201ENST00000623131 1990 ntBASIC19.74■□□□□ 0.75
VPS52Q8N1B4 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 IGHGP-201ENST00000390555 1178 ntBASIC19.74■□□□□ 0.75
VPS52Q8N1B4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AC079781.3-201ENST00000449110 356 ntBASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AL160237.2-201ENST00000556165 472 ntBASIC19.74■□□□□ 0.75
VPS52Q8N1B4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
VPS52Q8N1B4 AC093503.3-201ENST00000624917 2352 ntBASIC19.73■□□□□ 0.75
VPS52Q8N1B4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 Z69720.1-201ENST00000601483 472 ntBASIC19.73■□□□□ 0.75
VPS52Q8N1B4 AC024563.2-201ENST00000603282 481 ntBASIC19.73■□□□□ 0.75
VPS52Q8N1B4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.73■□□□□ 0.75
VPS52Q8N1B4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.72■□□□□ 0.75
VPS52Q8N1B4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 NEFHP1-201ENST00000412845 2629 ntBASIC19.72■□□□□ 0.75
VPS52Q8N1B4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
VPS52Q8N1B4 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms