Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 AL049812.1-201ENST00000432563 2267 ntBASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.06■□□□□ 0.48
TMEFF1Q8IYR6 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 AC009533.2-201ENST00000543664 586 ntBASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 CAND2-206ENST00000626378 333 ntTSL 5 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TMEFF1Q8IYR6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 MEG3-211ENST00000452514 461 ntTSL 3 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 INTS4P1-201ENST00000438455 1935 ntBASIC18.04■□□□□ 0.48
TMEFF1Q8IYR6 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 FAM220CP-201ENST00000395253 831 ntBASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 AC021087.4-201ENST00000563761 564 ntBASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 AC104109.2-201ENST00000602919 1418 ntBASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TMEFF1Q8IYR6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms