Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CPNE9Q8IYJ1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 SLC25A3P1-201ENST00000443844 931 ntBASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 NEK4P2-201ENST00000580004 1012 ntBASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CPNE9Q8IYJ1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 AL096828.2-201ENST00000567259 1965 ntBASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 AC009065.1-201ENST00000564055 1225 ntBASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 MIR3180-4-201ENST00000582223 153 ntBASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.03■□□□□ 0.48
CPNE9Q8IYJ1 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 LINC01126-201ENST00000623515 1646 ntBASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 AC010203.1-204ENST00000548782 407 ntBASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 AL138966.2-201ENST00000621997 464 ntBASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 AC141257.4-201ENST00000634557 245 ntBASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 AC136944.6-201ENST00000634818 245 ntBASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CPNE9Q8IYJ1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 AC068880.1-201ENST00000507289 2297 ntBASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CPNE9Q8IYJ1 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CPNE9Q8IYJ1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms