Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LINC00346Q8IVM7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.18
LINC00346Q8IVM7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LINC00346Q8IVM7 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
LINC00346Q8IVM7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 EGLN1P1-201ENST00000531623 762 ntBASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 NAPSB-206ENST00000562112 1266 ntBASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 AC010947.1-201ENST00000623454 693 ntBASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 AC010653.2-201ENST00000623505 997 ntBASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.14■□□□□ 0.17
LINC00346Q8IVM7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 KRT8P7-201ENST00000533003 1432 ntBASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 MMP23A-201ENST00000234610 1017 ntBASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
LINC00346Q8IVM7 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
LINC00346Q8IVM7 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms