Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC24.29■■□□□ 1.48
USP31Q70CQ4 AC008735.5-201ENST00000623544 497 ntBASIC24.29■■□□□ 1.48
USP31Q70CQ4 AC073592.4-201ENST00000623827 446 ntBASIC24.29■■□□□ 1.48
USP31Q70CQ4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
USP31Q70CQ4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 AC093010.1-201ENST00000473625 1624 ntBASIC24.29■■□□□ 1.48
USP31Q70CQ4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC24.29■■□□□ 1.48
USP31Q70CQ4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC24.29■■□□□ 1.48
USP31Q70CQ4 LBH-204ENST00000406087 559 ntTSL 4 BASIC24.29■■□□□ 1.48
USP31Q70CQ4 AC098831.1-202ENST00000438821 336 ntBASIC24.29■■□□□ 1.48
USP31Q70CQ4 OR7E14P-202ENST00000530490 1290 ntBASIC24.29■■□□□ 1.48
USP31Q70CQ4 NKAPP1-205ENST00000585790 367 ntBASIC24.29■■□□□ 1.48
USP31Q70CQ4 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
USP31Q70CQ4 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
USP31Q70CQ4 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
USP31Q70CQ4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
USP31Q70CQ4 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
USP31Q70CQ4 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
USP31Q70CQ4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC24.28■■□□□ 1.48
USP31Q70CQ4 AC107918.4-202ENST00000641623 219 ntBASIC24.28■■□□□ 1.48
USP31Q70CQ4 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 ZNF259P1-201ENST00000407656 1365 ntBASIC24.27■■□□□ 1.48
USP31Q70CQ4 KRT8P47-201ENST00000604727 1398 ntBASIC24.27■■□□□ 1.48
USP31Q70CQ4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 PMS2P7-201ENST00000506558 1336 ntBASIC24.27■■□□□ 1.48
USP31Q70CQ4 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
USP31Q70CQ4 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
USP31Q70CQ4 ESPNP-201ENST00000270691 2015 ntBASIC24.26■■□□□ 1.47
USP31Q70CQ4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC24.26■■□□□ 1.47
USP31Q70CQ4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USP31Q70CQ4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC24.26■■□□□ 1.47
USP31Q70CQ4 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
USP31Q70CQ4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
USP31Q70CQ4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
USP31Q70CQ4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
USP31Q70CQ4 CROCCP3-202ENST00000420820 1947 ntBASIC24.26■■□□□ 1.47
USP31Q70CQ4 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.26■■□□□ 1.47
USP31Q70CQ4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC24.26■■□□□ 1.47
USP31Q70CQ4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC24.26■■□□□ 1.47
USP31Q70CQ4 AC122714.2-201ENST00000502787 707 ntBASIC24.26■■□□□ 1.47
USP31Q70CQ4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC24.26■■□□□ 1.47
USP31Q70CQ4 HLA-J-201ENST00000462773 1622 ntBASIC24.26■■□□□ 1.47
USP31Q70CQ4 AC079776.2-201ENST00000641154 1609 ntBASIC24.26■■□□□ 1.47
USP31Q70CQ4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC24.26■■□□□ 1.47
USP31Q70CQ4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 PMPCAP1-201ENST00000508114 1576 ntBASIC24.25■■□□□ 1.47
USP31Q70CQ4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC24.25■■□□□ 1.47
USP31Q70CQ4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC24.25■■□□□ 1.47
USP31Q70CQ4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC24.25■■□□□ 1.47
USP31Q70CQ4 MTDHP4-201ENST00000600287 670 ntBASIC24.25■■□□□ 1.47
USP31Q70CQ4 AD001527.2-201ENST00000622994 785 ntBASIC24.25■■□□□ 1.47
USP31Q70CQ4 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC24.25■■□□□ 1.47
USP31Q70CQ4 AC010460.3-201ENST00000511359 1579 ntBASIC24.25■■□□□ 1.47
USP31Q70CQ4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
USP31Q70CQ4 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
USP31Q70CQ4 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC24.24■■□□□ 1.47
USP31Q70CQ4 AC104109.2-201ENST00000602919 1418 ntBASIC24.24■■□□□ 1.47
USP31Q70CQ4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC24.24■■□□□ 1.47
USP31Q70CQ4 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
USP31Q70CQ4 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
USP31Q70CQ4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms