Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 AC004408.2-201ENST00000623613 2777 ntBASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 NSUN5P1-202ENST00000421140 1535 ntBASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 NSUN5P2-203ENST00000457352 1529 ntBASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 AC246785.2-201ENST00000432512 513 ntBASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 AC138894.3-201ENST00000603787 634 ntBASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 AC009154.2-201ENST00000621177 724 ntBASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.24■□□□□ 0.83
SWSAP1Q6NVH7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 AL121772.3-201ENST00000610840 674 ntBASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SWSAP1Q6NVH7 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 AC091304.2-201ENST00000564639 760 ntBASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 AL691432.3-201ENST00000621860 400 ntBASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SWSAP1Q6NVH7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 TPM4P1-201ENST00000436100 807 ntBASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 MTCL1P1-201ENST00000446207 792 ntBASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 MINOS1P3-201ENST00000457048 203 ntBASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 KRT18P31-201ENST00000506277 1292 ntBASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 RN7SL510P-201ENST00000581311 263 ntBASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
SWSAP1Q6NVH7 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms