Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 AC004890.2-204ENST00000481968 304 ntBASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 TP53TG3HP-202ENST00000569755 579 ntBASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
COL13A1Q5TAT6 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 AC026120.1-201ENST00000611536 926 ntBASIC20.33■□□□□ 0.85
COL13A1Q5TAT6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 PMPCAP1-201ENST00000508114 1576 ntBASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
COL13A1Q5TAT6 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 AC092919.2-201ENST00000623631 1645 ntBASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 KRT8P48-201ENST00000515599 1220 ntBASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 CIPC-205ENST00000555437 566 ntTSL 3 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 AC008677.1-201ENST00000519230 1561 ntBASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.32■□□□□ 0.84
COL13A1Q5TAT6 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AC009102.3-201ENST00000623118 1491 ntBASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AC006116.8-202ENST00000587620 1550 ntBASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 KRT18P32-201ENST00000424695 1287 ntBASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 GPS2P2-201ENST00000430745 888 ntBASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 CDK4-206ENST00000549606 558 ntTSL 2 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 AL024507.2-201ENST00000606070 2574 ntBASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 SDHAP1-207ENST00000440850 2000 ntBASIC20.31■□□□□ 0.84
COL13A1Q5TAT6 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
COL13A1Q5TAT6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms