Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 AL163051.1-201ENST00000569214 1512 ntBASIC20.73■□□□□ 0.91
LONRF3Q496Y0 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.73■□□□□ 0.91
LONRF3Q496Y0 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 GMCL1P1-201ENST00000463439 1581 ntBASIC20.72■□□□□ 0.91
LONRF3Q496Y0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.72■□□□□ 0.91
LONRF3Q496Y0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 AL359075.1-203ENST00000462729 1002 ntBASIC20.72■□□□□ 0.91
LONRF3Q496Y0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 AL441883.1-201ENST00000566170 1045 ntBASIC20.72■□□□□ 0.91
LONRF3Q496Y0 AC140113.3-201ENST00000605663 199 ntBASIC20.72■□□□□ 0.91
LONRF3Q496Y0 AL358472.4-201ENST00000633140 710 ntBASIC20.72■□□□□ 0.91
LONRF3Q496Y0 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.72■□□□□ 0.91
LONRF3Q496Y0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LONRF3Q496Y0 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LONRF3Q496Y0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 CR769767.2-201ENST00000622735 460 ntBASIC20.7■□□□□ 0.9
LONRF3Q496Y0 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LONRF3Q496Y0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms