Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SREBF2Q12772 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SREBF2Q12772 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.78■□□□□ 0.92
SREBF2Q12772 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
SREBF2Q12772 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SREBF2Q12772 AC007375.3-201ENST00000600936 2314 ntBASIC20.77■□□□□ 0.92
SREBF2Q12772 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SREBF2Q12772 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SREBF2Q12772 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
SREBF2Q12772 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SREBF2Q12772 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC20.77■□□□□ 0.92
SREBF2Q12772 AC007967.3-201ENST00000434308 558 ntBASIC20.77■□□□□ 0.92
SREBF2Q12772 HLA-J-203ENST00000494367 1087 ntBASIC20.77■□□□□ 0.92
SREBF2Q12772 MAL2-202ENST00000531508 892 ntTSL 3 BASIC20.77■□□□□ 0.92
SREBF2Q12772 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.77■□□□□ 0.92
SREBF2Q12772 AL096865.1-201ENST00000606796 927 ntBASIC20.77■□□□□ 0.92
SREBF2Q12772 AL589182.2-201ENST00000619332 1049 ntBASIC20.77■□□□□ 0.92
SREBF2Q12772 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.77■□□□□ 0.92
SREBF2Q12772 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SREBF2Q12772 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SREBF2Q12772 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.77■□□□□ 0.92
SREBF2Q12772 AC112907.3-201ENST00000577781 2400 ntBASIC20.77■□□□□ 0.92
SREBF2Q12772 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SREBF2Q12772 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
SREBF2Q12772 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SREBF2Q12772 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SREBF2Q12772 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SREBF2Q12772 VN2R19P-201ENST00000442399 1052 ntBASIC20.76■□□□□ 0.91
SREBF2Q12772 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SREBF2Q12772 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.76■□□□□ 0.91
SREBF2Q12772 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SREBF2Q12772 SIGLEC16-201ENST00000599858 1437 ntBASIC20.76■□□□□ 0.91
SREBF2Q12772 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SREBF2Q12772 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SREBF2Q12772 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.75■□□□□ 0.91
SREBF2Q12772 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.75■□□□□ 0.91
SREBF2Q12772 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 TSEN15P1-201ENST00000423257 515 ntBASIC20.75■□□□□ 0.91
SREBF2Q12772 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC20.75■□□□□ 0.91
SREBF2Q12772 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SREBF2Q12772 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.75■□□□□ 0.91
SREBF2Q12772 AC018845.2-201ENST00000568326 409 ntBASIC20.75■□□□□ 0.91
SREBF2Q12772 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.75■□□□□ 0.91
SREBF2Q12772 AC027612.4-201ENST00000605371 583 ntBASIC20.75■□□□□ 0.91
SREBF2Q12772 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC20.75■□□□□ 0.91
SREBF2Q12772 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SREBF2Q12772 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC20.75■□□□□ 0.91
SREBF2Q12772 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.75■□□□□ 0.91
SREBF2Q12772 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
SREBF2Q12772 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 GPR89P-201ENST00000407924 1495 ntBASIC20.75■□□□□ 0.91
SREBF2Q12772 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SREBF2Q12772 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SREBF2Q12772 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.74■□□□□ 0.91
SREBF2Q12772 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.74■□□□□ 0.91
SREBF2Q12772 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.74■□□□□ 0.91
SREBF2Q12772 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 PTMS-202ENST00000389462 773 ntTSL 2 BASIC20.74■□□□□ 0.91
SREBF2Q12772 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC20.74■□□□□ 0.91
SREBF2Q12772 BCRP1-201ENST00000444246 691 ntBASIC20.74■□□□□ 0.91
SREBF2Q12772 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.74■□□□□ 0.91
SREBF2Q12772 MYLKP1-201ENST00000509077 1580 ntBASIC20.74■□□□□ 0.91
SREBF2Q12772 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.74■□□□□ 0.91
SREBF2Q12772 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SREBF2Q12772 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC20.74■□□□□ 0.91
SREBF2Q12772 AC093028.1-201ENST00000622998 982 ntBASIC20.74■□□□□ 0.91
SREBF2Q12772 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SREBF2Q12772 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.73■□□□□ 0.91
SREBF2Q12772 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SREBF2Q12772 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SREBF2Q12772 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SREBF2Q12772 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SREBF2Q12772 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.73■□□□□ 0.91
SREBF2Q12772 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SREBF2Q12772 AC092474.2-201ENST00000424288 719 ntBASIC20.73■□□□□ 0.91
SREBF2Q12772 PRSS29P-201ENST00000440800 595 ntBASIC20.73■□□□□ 0.91
SREBF2Q12772 HCG4B-203ENST00000450128 991 ntBASIC20.73■□□□□ 0.91
SREBF2Q12772 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.73■□□□□ 0.91
SREBF2Q12772 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SREBF2Q12772 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SREBF2Q12772 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.73■□□□□ 0.91
SREBF2Q12772 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms