Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.95■□□□□ 0.62
IRX4P78413 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
IRX4P78413 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.95■□□□□ 0.62
IRX4P78413 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.95■□□□□ 0.62
IRX4P78413 KRT8P41-201ENST00000533985 1514 ntBASIC18.95■□□□□ 0.62
IRX4P78413 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.95■□□□□ 0.62
IRX4P78413 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IRX4P78413 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
IRX4P78413 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.94■□□□□ 0.62
IRX4P78413 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
IRX4P78413 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX4P78413 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX4P78413 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.94■□□□□ 0.62
IRX4P78413 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.94■□□□□ 0.62
IRX4P78413 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.94■□□□□ 0.62
IRX4P78413 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX4P78413 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX4P78413 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.94■□□□□ 0.62
IRX4P78413 NEK4P2-201ENST00000580004 1012 ntBASIC18.94■□□□□ 0.62
IRX4P78413 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.94■□□□□ 0.62
IRX4P78413 AC092119.3-201ENST00000612618 583 ntBASIC18.94■□□□□ 0.62
IRX4P78413 NPAP1P7-201ENST00000613027 823 ntBASIC18.94■□□□□ 0.62
IRX4P78413 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.94■□□□□ 0.62
IRX4P78413 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.94■□□□□ 0.62
IRX4P78413 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.94■□□□□ 0.62
IRX4P78413 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.94■□□□□ 0.62
IRX4P78413 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
IRX4P78413 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
IRX4P78413 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
IRX4P78413 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.93■□□□□ 0.62
IRX4P78413 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.93■□□□□ 0.62
IRX4P78413 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX4P78413 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 CNP-204ENST00000472031 1019 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX4P78413 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.93■□□□□ 0.62
IRX4P78413 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX4P78413 RN7SL510P-201ENST00000581311 263 ntBASIC18.93■□□□□ 0.62
IRX4P78413 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX4P78413 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
IRX4P78413 FEM1AP3-201ENST00000403722 1741 ntBASIC18.93■□□□□ 0.62
IRX4P78413 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
IRX4P78413 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.93■□□□□ 0.62
IRX4P78413 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.93■□□□□ 0.62
IRX4P78413 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
IRX4P78413 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
IRX4P78413 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
IRX4P78413 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.92■□□□□ 0.62
IRX4P78413 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
IRX4P78413 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.92■□□□□ 0.62
IRX4P78413 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.92■□□□□ 0.62
IRX4P78413 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
IRX4P78413 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms