Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AIRN-201ENST00000601203 4374 ntBASIC17.29■□□□□ 0.36
RAE1P78406 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RAE1P78406 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.29■□□□□ 0.36
RAE1P78406 AP000523.1-201ENST00000398242 1049 ntBASIC17.29■□□□□ 0.36
RAE1P78406 PVRIG2P-201ENST00000435460 978 ntBASIC17.29■□□□□ 0.36
RAE1P78406 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.29■□□□□ 0.36
RAE1P78406 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.29■□□□□ 0.36
RAE1P78406 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.29■□□□□ 0.36
RAE1P78406 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.29■□□□□ 0.36
RAE1P78406 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
RAE1P78406 AL023973.1-201ENST00000624619 620 ntBASIC17.29■□□□□ 0.36
RAE1P78406 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.29■□□□□ 0.36
RAE1P78406 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.29■□□□□ 0.36
RAE1P78406 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RAE1P78406 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.29■□□□□ 0.36
RAE1P78406 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.29■□□□□ 0.36
RAE1P78406 LINC00896-202ENST00000609602 2128 ntBASIC17.29■□□□□ 0.36
RAE1P78406 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RAE1P78406 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RAE1P78406 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAE1P78406 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 AC012317.2-201ENST00000623305 2251 ntBASIC17.28■□□□□ 0.36
RAE1P78406 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 AC006116.8-202ENST00000587620 1550 ntBASIC17.28■□□□□ 0.36
RAE1P78406 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 KRT18P55-202ENST00000578578 1546 ntBASIC17.28■□□□□ 0.36
RAE1P78406 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.28■□□□□ 0.36
RAE1P78406 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RAE1P78406 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
RAE1P78406 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RAE1P78406 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.28■□□□□ 0.36
RAE1P78406 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
RAE1P78406 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.27■□□□□ 0.36
RAE1P78406 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.27■□□□□ 0.36
RAE1P78406 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.27■□□□□ 0.36
RAE1P78406 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.27■□□□□ 0.36
RAE1P78406 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
RAE1P78406 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
RAE1P78406 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.27■□□□□ 0.36
RAE1P78406 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
RAE1P78406 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RAE1P78406 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.27■□□□□ 0.35
RAE1P78406 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RAE1P78406 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
RAE1P78406 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAE1P78406 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAE1P78406 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAE1P78406 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
RAE1P78406 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
RAE1P78406 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
RAE1P78406 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
RAE1P78406 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.26■□□□□ 0.35
RAE1P78406 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms