Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNA1P78396 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 CSF3-203ENST00000394148 622 ntTSL 3 BASIC20.67■□□□□ 0.9
CCNA1P78396 FAM220CP-201ENST00000395253 831 ntBASIC20.67■□□□□ 0.9
CCNA1P78396 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CCNA1P78396 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.67■□□□□ 0.9
CCNA1P78396 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.67■□□□□ 0.9
CCNA1P78396 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.67■□□□□ 0.9
CCNA1P78396 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNA1P78396 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNA1P78396 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNA1P78396 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.67■□□□□ 0.9
CCNA1P78396 AL049812.1-201ENST00000432563 2267 ntBASIC20.67■□□□□ 0.9
CCNA1P78396 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 AC104109.2-201ENST00000602919 1418 ntBASIC20.67■□□□□ 0.9
CCNA1P78396 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.67■□□□□ 0.9
CCNA1P78396 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.67■□□□□ 0.9
CCNA1P78396 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CCNA1P78396 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCNA1P78396 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.67■□□□□ 0.9
CCNA1P78396 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.66■□□□□ 0.9
CCNA1P78396 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.66■□□□□ 0.9
CCNA1P78396 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.66■□□□□ 0.9
CCNA1P78396 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC20.66■□□□□ 0.9
CCNA1P78396 FAM197Y3-203ENST00000618346 717 ntBASIC20.66■□□□□ 0.9
CCNA1P78396 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
CCNA1P78396 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
CCNA1P78396 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCNA1P78396 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
CCNA1P78396 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.66■□□□□ 0.9
CCNA1P78396 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.65■□□□□ 0.9
CCNA1P78396 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.65■□□□□ 0.9
CCNA1P78396 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.65■□□□□ 0.9
CCNA1P78396 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.65■□□□□ 0.9
CCNA1P78396 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 LINC01126-201ENST00000623515 1646 ntBASIC20.65■□□□□ 0.9
CCNA1P78396 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.65■□□□□ 0.9
CCNA1P78396 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNA1P78396 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNA1P78396 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.65■□□□□ 0.9
CCNA1P78396 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.65■□□□□ 0.9
CCNA1P78396 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 AL591424.1-201ENST00000442569 1213 ntBASIC20.65■□□□□ 0.9
CCNA1P78396 AC112698.1-201ENST00000510299 916 ntBASIC20.65■□□□□ 0.9
CCNA1P78396 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.65■□□□□ 0.9
CCNA1P78396 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNA1P78396 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCNA1P78396 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
CCNA1P78396 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.65■□□□□ 0.9
CCNA1P78396 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.9
CCNA1P78396 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCNA1P78396 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCNA1P78396 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCNA1P78396 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCNA1P78396 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms