Protein–RNA interactions for Protein: P78364

PHC1, Polyhomeotic-like protein 1, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1P78364 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.37■□□□□ 0.37
PHC1P78364 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 LINC01126-201ENST00000623515 1646 ntBASIC17.37■□□□□ 0.37
PHC1P78364 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PHC1P78364 BCL2-203ENST00000589955 5011 ntBASIC17.37■□□□□ 0.37
PHC1P78364 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
PHC1P78364 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 AL355355.2-201ENST00000442321 338 ntBASIC17.37■□□□□ 0.37
PHC1P78364 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.37■□□□□ 0.37
PHC1P78364 AP003041.3-201ENST00000527151 707 ntBASIC17.37■□□□□ 0.37
PHC1P78364 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.37■□□□□ 0.37
PHC1P78364 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.37■□□□□ 0.37
PHC1P78364 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.37■□□□□ 0.37
PHC1P78364 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.37■□□□□ 0.37
PHC1P78364 AP001412.1-201ENST00000608405 714 ntBASIC17.37■□□□□ 0.37
PHC1P78364 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.37■□□□□ 0.37
PHC1P78364 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.37■□□□□ 0.37
PHC1P78364 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.37■□□□□ 0.37
PHC1P78364 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
PHC1P78364 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PHC1P78364 HOXB1-202ENST00000577092 1414 ntBASIC17.37■□□□□ 0.37
PHC1P78364 AC009102.3-201ENST00000623118 1491 ntBASIC17.37■□□□□ 0.37
PHC1P78364 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.37■□□□□ 0.37
PHC1P78364 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.37■□□□□ 0.37
PHC1P78364 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PHC1P78364 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
PHC1P78364 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PHC1P78364 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.36■□□□□ 0.37
PHC1P78364 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 MIR149-201ENST00000384879 89 ntBASIC17.36■□□□□ 0.37
PHC1P78364 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.36■□□□□ 0.37
PHC1P78364 AP003071.4-201ENST00000562276 1284 ntBASIC17.36■□□□□ 0.37
PHC1P78364 AL353719.1-201ENST00000566847 864 ntBASIC17.36■□□□□ 0.37
PHC1P78364 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.36■□□□□ 0.37
PHC1P78364 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 AP006294.2-201ENST00000641667 209 ntBASIC17.36■□□□□ 0.37
PHC1P78364 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PHC1P78364 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
PHC1P78364 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 AC012317.2-201ENST00000623305 2251 ntBASIC17.36■□□□□ 0.37
PHC1P78364 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PHC1P78364 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PHC1P78364 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.35■□□□□ 0.37
PHC1P78364 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.35■□□□□ 0.37
PHC1P78364 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.35■□□□□ 0.37
PHC1P78364 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.35■□□□□ 0.37
PHC1P78364 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
PHC1P78364 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PHC1P78364 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.35■□□□□ 0.37
PHC1P78364 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.35■□□□□ 0.37
PHC1P78364 AC093827.2-201ENST00000512654 315 ntBASIC17.35■□□□□ 0.37
PHC1P78364 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.35■□□□□ 0.37
PHC1P78364 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PHC1P78364 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms