Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.79■□□□□ 0.44
YBX1P67809 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
YBX1P67809 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
YBX1P67809 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YBX1P67809 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.78■□□□□ 0.44
YBX1P67809 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.78■□□□□ 0.44
YBX1P67809 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YBX1P67809 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
YBX1P67809 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
YBX1P67809 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
YBX1P67809 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.78■□□□□ 0.44
YBX1P67809 AC092597.1-201ENST00000487352 616 ntBASIC17.78■□□□□ 0.44
YBX1P67809 AC022616.7-201ENST00000525383 220 ntBASIC17.78■□□□□ 0.44
YBX1P67809 MIR3917-201ENST00000580971 93 ntBASIC17.78■□□□□ 0.44
YBX1P67809 AL031432.5-201ENST00000641059 760 ntBASIC17.78■□□□□ 0.44
YBX1P67809 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
YBX1P67809 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.78■□□□□ 0.44
YBX1P67809 KRT8P7-201ENST00000533003 1432 ntBASIC17.78■□□□□ 0.44
YBX1P67809 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.78■□□□□ 0.44
YBX1P67809 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YBX1P67809 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
YBX1P67809 AL162741.1-201ENST00000565563 1558 ntBASIC17.78■□□□□ 0.44
YBX1P67809 AIRN-201ENST00000601203 4374 ntBASIC17.78■□□□□ 0.44
YBX1P67809 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
YBX1P67809 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
YBX1P67809 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.78■□□□□ 0.44
YBX1P67809 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.78■□□□□ 0.44
YBX1P67809 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.78■□□□□ 0.44
YBX1P67809 SDHAP2-201ENST00000455183 2001 ntBASIC17.77■□□□□ 0.44
YBX1P67809 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YBX1P67809 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
YBX1P67809 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
YBX1P67809 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.77■□□□□ 0.44
YBX1P67809 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.77■□□□□ 0.44
YBX1P67809 RASA4DP-201ENST00000460726 1199 ntBASIC17.77■□□□□ 0.44
YBX1P67809 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
YBX1P67809 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.77■□□□□ 0.44
YBX1P67809 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
YBX1P67809 AC134043.2-201ENST00000624206 2238 ntBASIC17.77■□□□□ 0.44
YBX1P67809 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
YBX1P67809 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
YBX1P67809 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
YBX1P67809 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.77■□□□□ 0.43
YBX1P67809 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
YBX1P67809 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 MIR1224-201ENST00000408193 85 ntBASIC17.76■□□□□ 0.43
YBX1P67809 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
YBX1P67809 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.76■□□□□ 0.43
YBX1P67809 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.76■□□□□ 0.43
YBX1P67809 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.76■□□□□ 0.43
YBX1P67809 NTF6B-201ENST00000591913 560 ntBASIC17.76■□□□□ 0.43
YBX1P67809 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.76■□□□□ 0.43
YBX1P67809 LINC00896-202ENST00000609602 2128 ntBASIC17.76■□□□□ 0.43
YBX1P67809 AC010331.1-201ENST00000611423 582 ntBASIC17.76■□□□□ 0.43
YBX1P67809 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.76■□□□□ 0.43
YBX1P67809 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
YBX1P67809 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
YBX1P67809 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 AC093677.2-201ENST00000600169 1863 ntBASIC17.75■□□□□ 0.43
YBX1P67809 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.75■□□□□ 0.43
YBX1P67809 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.75■□□□□ 0.43
YBX1P67809 FAM8A6P-201ENST00000407496 1135 ntBASIC17.75■□□□□ 0.43
YBX1P67809 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.75■□□□□ 0.43
YBX1P67809 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.75■□□□□ 0.43
YBX1P67809 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.75■□□□□ 0.43
YBX1P67809 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.75■□□□□ 0.43
YBX1P67809 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.75■□□□□ 0.43
YBX1P67809 HYMAI.1-201ENST00000620949 238 ntBASIC17.75■□□□□ 0.43
YBX1P67809 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.75■□□□□ 0.43
YBX1P67809 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
YBX1P67809 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.75■□□□□ 0.43
YBX1P67809 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.75■□□□□ 0.43
YBX1P67809 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
YBX1P67809 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms