Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 HOXB1-202ENST00000577092 1414 ntBASIC16.71■□□□□ 0.27
CLDN20P56880 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN20P56880 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 ARMC10P1-201ENST00000313754 855 ntBASIC16.71■□□□□ 0.27
CLDN20P56880 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN20P56880 SPDYE15P-201ENST00000424157 909 ntBASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN20P56880 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.71■□□□□ 0.27
CLDN20P56880 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 AC090340.1-201ENST00000620778 4980 ntBASIC16.71■□□□□ 0.27
CLDN20P56880 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.71■□□□□ 0.27
CLDN20P56880 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLDN20P56880 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CLDN20P56880 AC009053.2-201ENST00000563701 2365 ntBASIC16.71■□□□□ 0.26
CLDN20P56880 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.26
CLDN20P56880 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.7■□□□□ 0.26
CLDN20P56880 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.7■□□□□ 0.26
CLDN20P56880 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN20P56880 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN20P56880 AC087388.1-201ENST00000571370 1112 ntBASIC16.7■□□□□ 0.26
CLDN20P56880 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.7■□□□□ 0.26
CLDN20P56880 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
CLDN20P56880 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
CLDN20P56880 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN20P56880 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CLDN20P56880 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN20P56880 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CLDN20P56880 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 KRT8P7-201ENST00000533003 1432 ntBASIC16.7■□□□□ 0.26
CLDN20P56880 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.7■□□□□ 0.26
CLDN20P56880 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLDN20P56880 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.69■□□□□ 0.26
CLDN20P56880 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 ABALON-201ENST00000629058 1903 ntBASIC16.69■□□□□ 0.26
CLDN20P56880 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 STARP1-201ENST00000397973 869 ntBASIC16.69■□□□□ 0.26
CLDN20P56880 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.69■□□□□ 0.26
CLDN20P56880 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLDN20P56880 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms