Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PAX9P55771 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PAX9P55771 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PAX9P55771 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.64□□□□□ -0.07
PAX9P55771 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PAX9P55771 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PAX9P55771 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PAX9P55771 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.64□□□□□ -0.07
PAX9P55771 KRT16P5-201ENST00000455284 522 ntBASIC14.64□□□□□ -0.07
PAX9P55771 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PAX9P55771 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.64□□□□□ -0.07
PAX9P55771 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.64□□□□□ -0.07
PAX9P55771 AC008403.3-201ENST00000598924 454 ntBASIC14.64□□□□□ -0.07
PAX9P55771 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.64□□□□□ -0.07
PAX9P55771 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.64□□□□□ -0.07
PAX9P55771 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PAX9P55771 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.64□□□□□ -0.07
PAX9P55771 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PAX9P55771 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.64□□□□□ -0.07
PAX9P55771 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC14.64□□□□□ -0.07
PAX9P55771 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
PAX9P55771 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.63□□□□□ -0.07
PAX9P55771 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC14.63□□□□□ -0.07
PAX9P55771 AC004951.3-201ENST00000418645 1148 ntBASIC14.63□□□□□ -0.07
PAX9P55771 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PAX9P55771 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.63□□□□□ -0.07
PAX9P55771 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC14.63□□□□□ -0.07
PAX9P55771 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.63□□□□□ -0.07
PAX9P55771 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 AL138688.1-201ENST00000624851 1594 ntBASIC14.63□□□□□ -0.07
PAX9P55771 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
PAX9P55771 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
PAX9P55771 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PAX9P55771 AC034236.2-201ENST00000606662 1610 ntBASIC14.63□□□□□ -0.07
PAX9P55771 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC14.63□□□□□ -0.07
PAX9P55771 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PAX9P55771 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
PAX9P55771 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PAX9P55771 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
PAX9P55771 ID1-201ENST00000376105 1233 ntBASIC14.62□□□□□ -0.07
PAX9P55771 CROCCP2-202ENST00000412962 2773 ntBASIC14.62□□□□□ -0.07
PAX9P55771 HLA-L-209ENST00000420110 1011 ntBASIC14.62□□□□□ -0.07
PAX9P55771 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC14.62□□□□□ -0.07
PAX9P55771 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.62□□□□□ -0.07
PAX9P55771 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
PAX9P55771 AC008040.2-201ENST00000461049 708 ntBASIC14.62□□□□□ -0.07
PAX9P55771 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
PAX9P55771 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC14.62□□□□□ -0.07
PAX9P55771 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.62□□□□□ -0.07
PAX9P55771 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.62□□□□□ -0.07
PAX9P55771 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms