Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH8P55286 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH8P55286 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 TSPY22P-201ENST00000427496 604 ntBASIC19.42■□□□□ 0.7
CDH8P55286 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.42■□□□□ 0.7
CDH8P55286 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDH8P55286 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH8P55286 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH8P55286 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH8P55286 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH8P55286 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH8P55286 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH8P55286 GPR32P1-201ENST00000601788 811 ntBASIC19.42■□□□□ 0.7
CDH8P55286 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.42■□□□□ 0.7
CDH8P55286 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH8P55286 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.42■□□□□ 0.7
CDH8P55286 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 AL096828.2-201ENST00000567259 1965 ntBASIC19.42■□□□□ 0.7
CDH8P55286 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDH8P55286 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDH8P55286 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.42■□□□□ 0.7
CDH8P55286 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDH8P55286 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDH8P55286 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH8P55286 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH8P55286 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.41■□□□□ 0.7
CDH8P55286 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH8P55286 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH8P55286 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.41■□□□□ 0.7
CDH8P55286 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.41■□□□□ 0.7
CDH8P55286 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.41■□□□□ 0.7
CDH8P55286 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 AL353692.3-201ENST00000407031 1396 ntBASIC19.41■□□□□ 0.7
CDH8P55286 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.41■□□□□ 0.7
CDH8P55286 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.41■□□□□ 0.7
CDH8P55286 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDH8P55286 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDH8P55286 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH8P55286 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 AC113404.2-201ENST00000507884 177 ntBASIC19.4■□□□□ 0.7
CDH8P55286 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CDH8P55286 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH8P55286 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.4■□□□□ 0.7
CDH8P55286 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.4■□□□□ 0.7
CDH8P55286 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH8P55286 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.4■□□□□ 0.7
CDH8P55286 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CDH8P55286 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 AC016734.2-201ENST00000624325 1377 ntBASIC19.4■□□□□ 0.7
CDH8P55286 REXO1L9P-201ENST00000604264 2108 ntBASIC19.4■□□□□ 0.7
CDH8P55286 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDH8P55286 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDH8P55286 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH8P55286 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH8P55286 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH8P55286 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH8P55286 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDH8P55286 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.39■□□□□ 0.7
CDH8P55286 RNF165-205ENST00000588679 2904 ntBASIC19.39■□□□□ 0.7
CDH8P55286 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDH8P55286 UPK3BP1-201ENST00000428678 509 ntBASIC19.39■□□□□ 0.69
CDH8P55286 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.39■□□□□ 0.69
CDH8P55286 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms