Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCNKAP51800 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CLCNKAP51800 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 RN7SL606P-201ENST00000472779 293 ntBASIC17.84■□□□□ 0.45
CLCNKAP51800 KRT18P56-201ENST00000507275 550 ntBASIC17.84■□□□□ 0.45
CLCNKAP51800 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.84■□□□□ 0.45
CLCNKAP51800 BCL2-203ENST00000589955 5011 ntBASIC17.84■□□□□ 0.45
CLCNKAP51800 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.84■□□□□ 0.45
CLCNKAP51800 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
CLCNKAP51800 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CLCNKAP51800 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 LINC01126-201ENST00000623515 1646 ntBASIC17.83■□□□□ 0.45
CLCNKAP51800 GMCL1P1-201ENST00000463439 1581 ntBASIC17.83■□□□□ 0.45
CLCNKAP51800 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CLCNKAP51800 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
CLCNKAP51800 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.83■□□□□ 0.45
CLCNKAP51800 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.83■□□□□ 0.45
CLCNKAP51800 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CLCNKAP51800 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
CLCNKAP51800 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 GUSBP12-201ENST00000513727 720 ntBASIC17.83■□□□□ 0.44
CLCNKAP51800 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
CLCNKAP51800 AP002414.4-201ENST00000589764 1148 ntBASIC17.83■□□□□ 0.44
CLCNKAP51800 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.83■□□□□ 0.44
CLCNKAP51800 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.83■□□□□ 0.44
CLCNKAP51800 AC092329.2-201ENST00000598402 547 ntBASIC17.83■□□□□ 0.44
CLCNKAP51800 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCNKAP51800 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC17.83■□□□□ 0.44
CLCNKAP51800 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.83■□□□□ 0.44
CLCNKAP51800 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.83■□□□□ 0.44
CLCNKAP51800 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
CLCNKAP51800 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CLCNKAP51800 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCNKAP51800 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCNKAP51800 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCNKAP51800 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLCNKAP51800 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.82■□□□□ 0.44
CLCNKAP51800 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CLCNKAP51800 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
CLCNKAP51800 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
CLCNKAP51800 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.82■□□□□ 0.44
CLCNKAP51800 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCNKAP51800 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CLCNKAP51800 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
CLCNKAP51800 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.82■□□□□ 0.44
CLCNKAP51800 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.82■□□□□ 0.44
CLCNKAP51800 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CLCNKAP51800 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.82■□□□□ 0.44
CLCNKAP51800 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CLCNKAP51800 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.81■□□□□ 0.44
CLCNKAP51800 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.81■□□□□ 0.44
CLCNKAP51800 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms