Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN4P51793 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.13■□□□□ 0.65
CLCN4P51793 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN4P51793 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCN4P51793 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCN4P51793 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CLCN4P51793 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN4P51793 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.13■□□□□ 0.65
CLCN4P51793 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.13■□□□□ 0.65
CLCN4P51793 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
CLCN4P51793 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
CLCN4P51793 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CLCN4P51793 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLCN4P51793 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLCN4P51793 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCN4P51793 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.12■□□□□ 0.65
CLCN4P51793 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.12■□□□□ 0.65
CLCN4P51793 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN4P51793 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.12■□□□□ 0.65
CLCN4P51793 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.12■□□□□ 0.65
CLCN4P51793 AC011467.2-201ENST00000598425 242 ntBASIC19.12■□□□□ 0.65
CLCN4P51793 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLCN4P51793 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
CLCN4P51793 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLCN4P51793 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN4P51793 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN4P51793 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLCN4P51793 AC125634.1-201ENST00000438758 1403 ntBASIC19.11■□□□□ 0.65
CLCN4P51793 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.11■□□□□ 0.65
CLCN4P51793 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.11■□□□□ 0.65
CLCN4P51793 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLCN4P51793 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.11■□□□□ 0.65
CLCN4P51793 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN4P51793 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.11■□□□□ 0.65
CLCN4P51793 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.11■□□□□ 0.65
CLCN4P51793 AC116407.3-201ENST00000623905 1129 ntBASIC19.11■□□□□ 0.65
CLCN4P51793 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLCN4P51793 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CLCN4P51793 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
CLCN4P51793 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
CLCN4P51793 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLCN4P51793 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN4P51793 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN4P51793 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.1■□□□□ 0.65
CLCN4P51793 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN4P51793 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.1■□□□□ 0.65
CLCN4P51793 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN4P51793 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN4P51793 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.1■□□□□ 0.65
CLCN4P51793 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN4P51793 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.1■□□□□ 0.65
CLCN4P51793 LINC00602-201ENST00000629776 2065 ntBASIC19.1■□□□□ 0.65
CLCN4P51793 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLCN4P51793 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN4P51793 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN4P51793 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN4P51793 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN4P51793 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.09■□□□□ 0.65
CLCN4P51793 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN4P51793 PMS2P7-201ENST00000506558 1336 ntBASIC19.09■□□□□ 0.65
CLCN4P51793 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLCN4P51793 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.09■□□□□ 0.65
CLCN4P51793 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms