Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SLC1A2P43004 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A2P43004 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.17■□□□□ 0.5
SLC1A2P43004 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
SLC1A2P43004 ECEL1P3-201ENST00000427961 737 ntBASIC18.17■□□□□ 0.5
SLC1A2P43004 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC1A2P43004 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.17■□□□□ 0.5
SLC1A2P43004 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A2P43004 NEK4P2-201ENST00000580004 1012 ntBASIC18.17■□□□□ 0.5
SLC1A2P43004 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A2P43004 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC1A2P43004 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SLC1A2P43004 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SLC1A2P43004 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.17■□□□□ 0.5
SLC1A2P43004 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
SLC1A2P43004 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 GNAS-203ENST00000306120 1878 ntBASIC18.16■□□□□ 0.5
SLC1A2P43004 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.16■□□□□ 0.5
SLC1A2P43004 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A2P43004 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A2P43004 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A2P43004 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A2P43004 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A2P43004 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A2P43004 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A2P43004 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A2P43004 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.16■□□□□ 0.5
SLC1A2P43004 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SLC1A2P43004 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.16■□□□□ 0.5
SLC1A2P43004 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
SLC1A2P43004 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SLC1A2P43004 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A2P43004 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SLC1A2P43004 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A2P43004 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
SLC1A2P43004 AC087499.1-201ENST00000418141 1075 ntBASIC18.15■□□□□ 0.5
SLC1A2P43004 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.15■□□□□ 0.5
SLC1A2P43004 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A2P43004 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A2P43004 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SLC1A2P43004 KRT18P22-201ENST00000402024 1347 ntBASIC18.15■□□□□ 0.5
SLC1A2P43004 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
SLC1A2P43004 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.15■□□□□ 0.5
SLC1A2P43004 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SLC1A2P43004 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.15■□□□□ 0.5
SLC1A2P43004 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A2P43004 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.14■□□□□ 0.5
SLC1A2P43004 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A2P43004 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A2P43004 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
SLC1A2P43004 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SLC1A2P43004 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC1A2P43004 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms