Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.83■■□□□ 1.25
RFC4P35249 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC22.83■■□□□ 1.25
RFC4P35249 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC22.83■■□□□ 1.25
RFC4P35249 AC112698.1-201ENST00000510299 916 ntBASIC22.83■■□□□ 1.25
RFC4P35249 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.83■■□□□ 1.25
RFC4P35249 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.83■■□□□ 1.25
RFC4P35249 MTDHP5-201ENST00000598980 586 ntBASIC22.83■■□□□ 1.25
RFC4P35249 AP000867.4-201ENST00000641616 219 ntBASIC22.83■■□□□ 1.25
RFC4P35249 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
RFC4P35249 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC22.83■■□□□ 1.25
RFC4P35249 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
RFC4P35249 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC22.83■■□□□ 1.24
RFC4P35249 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RFC4P35249 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
RFC4P35249 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFC4P35249 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
RFC4P35249 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC22.82■■□□□ 1.24
RFC4P35249 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
RFC4P35249 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC22.82■■□□□ 1.24
RFC4P35249 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RFC4P35249 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC22.82■■□□□ 1.24
RFC4P35249 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC22.82■■□□□ 1.24
RFC4P35249 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RFC4P35249 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.82■■□□□ 1.24
RFC4P35249 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC22.82■■□□□ 1.24
RFC4P35249 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC22.82■■□□□ 1.24
RFC4P35249 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.82■■□□□ 1.24
RFC4P35249 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC22.82■■□□□ 1.24
RFC4P35249 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC22.82■■□□□ 1.24
RFC4P35249 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.82■■□□□ 1.24
RFC4P35249 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC22.82■■□□□ 1.24
RFC4P35249 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.82■■□□□ 1.24
RFC4P35249 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
RFC4P35249 LINC01126-201ENST00000623515 1646 ntBASIC22.82■■□□□ 1.24
RFC4P35249 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.82■■□□□ 1.24
RFC4P35249 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.82■■□□□ 1.24
RFC4P35249 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC22.81■■□□□ 1.24
RFC4P35249 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
RFC4P35249 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.81■■□□□ 1.24
RFC4P35249 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.81■■□□□ 1.24
RFC4P35249 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.81■■□□□ 1.24
RFC4P35249 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC22.81■■□□□ 1.24
RFC4P35249 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC22.81■■□□□ 1.24
RFC4P35249 RPS15-207ENST00000591032 550 ntTSL 3 BASIC22.81■■□□□ 1.24
RFC4P35249 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC22.81■■□□□ 1.24
RFC4P35249 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.81■■□□□ 1.24
RFC4P35249 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.81■■□□□ 1.24
RFC4P35249 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
RFC4P35249 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC22.81■■□□□ 1.24
RFC4P35249 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.8■■□□□ 1.24
RFC4P35249 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.8■■□□□ 1.24
RFC4P35249 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.8■■□□□ 1.24
RFC4P35249 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC22.8■■□□□ 1.24
RFC4P35249 LBH-203ENST00000404397 543 ntTSL 4 BASIC22.8■■□□□ 1.24
RFC4P35249 AC211486.1-202ENST00000416371 468 ntBASIC22.8■■□□□ 1.24
RFC4P35249 AC211476.1-201ENST00000503899 468 ntBASIC22.8■■□□□ 1.24
RFC4P35249 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC22.8■■□□□ 1.24
RFC4P35249 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC22.8■■□□□ 1.24
RFC4P35249 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC22.8■■□□□ 1.24
RFC4P35249 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
RFC4P35249 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.8■■□□□ 1.24
RFC4P35249 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
RFC4P35249 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC22.8■■□□□ 1.24
RFC4P35249 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RFC4P35249 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFC4P35249 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
RFC4P35249 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
RFC4P35249 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFC4P35249 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
RFC4P35249 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFC4P35249 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC22.79■■□□□ 1.24
RFC4P35249 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC22.79■■□□□ 1.24
RFC4P35249 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFC4P35249 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
RFC4P35249 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
RFC4P35249 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms