Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN7P35236 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN7P35236 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN7P35236 AL512604.3-201ENST00000569583 964 ntBASIC18.85■□□□□ 0.61
PTPN7P35236 NEK4P2-201ENST00000580004 1012 ntBASIC18.85■□□□□ 0.61
PTPN7P35236 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.85■□□□□ 0.61
PTPN7P35236 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.85■□□□□ 0.61
PTPN7P35236 FAM87A-204ENST00000613235 858 ntBASIC18.85■□□□□ 0.61
PTPN7P35236 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.85■□□□□ 0.61
PTPN7P35236 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN7P35236 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN7P35236 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PTPN7P35236 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN7P35236 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN7P35236 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN7P35236 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PTPN7P35236 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
PTPN7P35236 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PTPN7P35236 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.83■□□□□ 0.61
PTPN7P35236 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.83■□□□□ 0.61
PTPN7P35236 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
PTPN7P35236 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN7P35236 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN7P35236 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PTPN7P35236 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN7P35236 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN7P35236 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
PTPN7P35236 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.61
PTPN7P35236 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
PTPN7P35236 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN7P35236 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN7P35236 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.83■□□□□ 0.6
PTPN7P35236 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 AC009947.2-201ENST00000444014 672 ntBASIC18.83■□□□□ 0.6
PTPN7P35236 TSPY15P-201ENST00000457163 923 ntBASIC18.83■□□□□ 0.6
PTPN7P35236 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 NAPSB-206ENST00000562112 1266 ntBASIC18.83■□□□□ 0.6
PTPN7P35236 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN7P35236 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.83■□□□□ 0.6
PTPN7P35236 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PTPN7P35236 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PTPN7P35236 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.83■□□□□ 0.6
PTPN7P35236 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PTPN7P35236 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.83■□□□□ 0.6
PTPN7P35236 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN7P35236 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.82■□□□□ 0.6
PTPN7P35236 AC090340.1-201ENST00000620778 4980 ntBASIC18.82■□□□□ 0.6
PTPN7P35236 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 HMGA1P5-201ENST00000412453 271 ntBASIC18.82■□□□□ 0.6
PTPN7P35236 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.82■□□□□ 0.6
PTPN7P35236 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
PTPN7P35236 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN7P35236 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PTPN7P35236 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN7P35236 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC18.82■□□□□ 0.6
PTPN7P35236 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 AC132938.6-201ENST00000623828 1655 ntBASIC18.82■□□□□ 0.6
PTPN7P35236 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
PTPN7P35236 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PTPN7P35236 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.81■□□□□ 0.6
PTPN7P35236 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
PTPN7P35236 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PTPN7P35236 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
PTPN7P35236 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
PTPN7P35236 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PTPN7P35236 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms