Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN6P29350 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN6P29350 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN6P29350 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
PTPN6P29350 AC113347.1-201ENST00000413321 391 ntBASIC17.3■□□□□ 0.36
PTPN6P29350 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.3■□□□□ 0.36
PTPN6P29350 AC007663.1-201ENST00000438948 1240 ntBASIC17.3■□□□□ 0.36
PTPN6P29350 TSPY17P-201ENST00000450329 467 ntBASIC17.3■□□□□ 0.36
PTPN6P29350 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.3■□□□□ 0.36
PTPN6P29350 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN6P29350 FAM87A-204ENST00000613235 858 ntBASIC17.3■□□□□ 0.36
PTPN6P29350 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN6P29350 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PTPN6P29350 AC006116.8-202ENST00000587620 1550 ntBASIC17.3■□□□□ 0.36
PTPN6P29350 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.3■□□□□ 0.36
PTPN6P29350 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.3■□□□□ 0.36
PTPN6P29350 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PTPN6P29350 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTPN6P29350 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.29■□□□□ 0.36
PTPN6P29350 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTPN6P29350 RCN1P1-201ENST00000400413 996 ntBASIC17.29■□□□□ 0.36
PTPN6P29350 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.29■□□□□ 0.36
PTPN6P29350 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN6P29350 FAM210CP-201ENST00000445714 574 ntBASIC17.29■□□□□ 0.36
PTPN6P29350 AL353719.1-201ENST00000566847 864 ntBASIC17.29■□□□□ 0.36
PTPN6P29350 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PTPN6P29350 AC010653.2-201ENST00000623505 997 ntBASIC17.29■□□□□ 0.36
PTPN6P29350 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN6P29350 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 AC009102.3-201ENST00000623118 1491 ntBASIC17.29■□□□□ 0.36
PTPN6P29350 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PTPN6P29350 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.29■□□□□ 0.36
PTPN6P29350 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PTPN6P29350 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.29■□□□□ 0.36
PTPN6P29350 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN6P29350 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN6P29350 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN6P29350 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN6P29350 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN6P29350 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN6P29350 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
PTPN6P29350 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 MIR149-201ENST00000384879 89 ntBASIC17.28■□□□□ 0.36
PTPN6P29350 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.28■□□□□ 0.36
PTPN6P29350 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.28■□□□□ 0.36
PTPN6P29350 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PTPN6P29350 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 AC093010.1-201ENST00000473625 1624 ntBASIC17.28■□□□□ 0.36
PTPN6P29350 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PTPN6P29350 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN6P29350 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
PTPN6P29350 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
PTPN6P29350 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 AC012317.2-201ENST00000623305 2251 ntBASIC17.27■□□□□ 0.36
PTPN6P29350 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
PTPN6P29350 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN6P29350 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PTPN6P29350 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PTPN6P29350 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.27■□□□□ 0.36
PTPN6P29350 AC005521.1-201ENST00000393351 872 ntBASIC17.27■□□□□ 0.36
PTPN6P29350 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.27■□□□□ 0.36
PTPN6P29350 KRT18P21-201ENST00000515767 1272 ntBASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms