Protein–RNA interactions for Protein: P28749

RBL1, Retinoblastoma-like protein 1, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBL1P28749 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
RBL1P28749 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.7■□□□□ 0.58
RBL1P28749 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
RBL1P28749 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.7■□□□□ 0.58
RBL1P28749 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RBL1P28749 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.7■□□□□ 0.58
RBL1P28749 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
RBL1P28749 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
RBL1P28749 AC087499.1-201ENST00000418141 1075 ntBASIC18.7■□□□□ 0.58
RBL1P28749 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.7■□□□□ 0.58
RBL1P28749 SLC25A6P5-201ENST00000435663 894 ntBASIC18.7■□□□□ 0.58
RBL1P28749 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
RBL1P28749 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.7■□□□□ 0.58
RBL1P28749 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.7■□□□□ 0.58
RBL1P28749 NEK4P2-201ENST00000580004 1012 ntBASIC18.7■□□□□ 0.58
RBL1P28749 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.7■□□□□ 0.58
RBL1P28749 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.7■□□□□ 0.58
RBL1P28749 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
RBL1P28749 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.7■□□□□ 0.58
RBL1P28749 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.7■□□□□ 0.58
RBL1P28749 KRT18P22-201ENST00000402024 1347 ntBASIC18.7■□□□□ 0.58
RBL1P28749 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
RBL1P28749 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
RBL1P28749 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RBL1P28749 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.69■□□□□ 0.58
RBL1P28749 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 ECEL1P3-201ENST00000427961 737 ntBASIC18.69■□□□□ 0.58
RBL1P28749 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.69■□□□□ 0.58
RBL1P28749 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
RBL1P28749 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.69■□□□□ 0.58
RBL1P28749 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RBL1P28749 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.68■□□□□ 0.58
RBL1P28749 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RBL1P28749 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.68■□□□□ 0.58
RBL1P28749 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RBL1P28749 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.68■□□□□ 0.58
RBL1P28749 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.68■□□□□ 0.58
RBL1P28749 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RBL1P28749 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RBL1P28749 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.68■□□□□ 0.58
RBL1P28749 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBL1P28749 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBL1P28749 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
RBL1P28749 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RBL1P28749 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RBL1P28749 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBL1P28749 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBL1P28749 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RBL1P28749 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms