Protein–RNA interactions for Protein: P21953

BCKDHB, 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDHBP21953 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
BCKDHBP21953 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.97■□□□□ 0.47
BCKDHBP21953 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
BCKDHBP21953 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BCKDHBP21953 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BCKDHBP21953 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.97■□□□□ 0.47
BCKDHBP21953 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
BCKDHBP21953 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.96■□□□□ 0.47
BCKDHBP21953 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.96■□□□□ 0.47
BCKDHBP21953 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 RPSAP43-201ENST00000402237 625 ntBASIC17.96■□□□□ 0.47
BCKDHBP21953 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.96■□□□□ 0.47
BCKDHBP21953 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.96■□□□□ 0.47
BCKDHBP21953 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.96■□□□□ 0.47
BCKDHBP21953 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.96■□□□□ 0.47
BCKDHBP21953 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.96■□□□□ 0.47
BCKDHBP21953 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
BCKDHBP21953 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.96■□□□□ 0.47
BCKDHBP21953 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.96■□□□□ 0.47
BCKDHBP21953 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.96■□□□□ 0.47
BCKDHBP21953 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.96■□□□□ 0.47
BCKDHBP21953 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
BCKDHBP21953 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
BCKDHBP21953 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.96■□□□□ 0.47
BCKDHBP21953 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
BCKDHBP21953 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
BCKDHBP21953 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
BCKDHBP21953 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 LINC01126-201ENST00000623515 1646 ntBASIC17.95■□□□□ 0.46
BCKDHBP21953 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BCKDHBP21953 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BCKDHBP21953 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
BCKDHBP21953 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BCKDHBP21953 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.95■□□□□ 0.46
BCKDHBP21953 RPS8P6-201ENST00000426177 609 ntBASIC17.95■□□□□ 0.46
BCKDHBP21953 GPX1P2-201ENST00000429271 606 ntBASIC17.95■□□□□ 0.46
BCKDHBP21953 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 AL591424.1-201ENST00000442569 1213 ntBASIC17.95■□□□□ 0.46
BCKDHBP21953 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 AL139424.1-201ENST00000607572 797 ntBASIC17.95■□□□□ 0.46
BCKDHBP21953 AC008735.5-201ENST00000623544 497 ntBASIC17.95■□□□□ 0.46
BCKDHBP21953 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
BCKDHBP21953 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
BCKDHBP21953 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
BCKDHBP21953 AP002414.3-201ENST00000589352 1468 ntBASIC17.95■□□□□ 0.46
BCKDHBP21953 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.94■□□□□ 0.46
BCKDHBP21953 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
BCKDHBP21953 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.94■□□□□ 0.46
BCKDHBP21953 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
BCKDHBP21953 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.94■□□□□ 0.46
BCKDHBP21953 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.94■□□□□ 0.46
BCKDHBP21953 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 YBX2P1-201ENST00000394192 760 ntBASIC17.94■□□□□ 0.46
BCKDHBP21953 HMGN1P19-201ENST00000436976 333 ntBASIC17.94■□□□□ 0.46
BCKDHBP21953 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.94■□□□□ 0.46
BCKDHBP21953 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.94■□□□□ 0.46
BCKDHBP21953 NKAPP1-205ENST00000585790 367 ntBASIC17.94■□□□□ 0.46
BCKDHBP21953 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC17.94■□□□□ 0.46
BCKDHBP21953 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
BCKDHBP21953 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms