Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.13■□□□□ 0.17
MSR1P21757 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSR1P21757 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSR1P21757 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
MSR1P21757 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
MSR1P21757 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
MSR1P21757 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MSR1P21757 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.12■□□□□ 0.17
MSR1P21757 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MSR1P21757 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
MSR1P21757 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 LIN28AP1-201ENST00000429574 405 ntBASIC16.12■□□□□ 0.17
MSR1P21757 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.12■□□□□ 0.17
MSR1P21757 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.12■□□□□ 0.17
MSR1P21757 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
MSR1P21757 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 NOC2LP1-202ENST00000452600 2235 ntBASIC16.12■□□□□ 0.17
MSR1P21757 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.12■□□□□ 0.17
MSR1P21757 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
MSR1P21757 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.12■□□□□ 0.17
MSR1P21757 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.11■□□□□ 0.17
MSR1P21757 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
MSR1P21757 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
MSR1P21757 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MSR1P21757 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
MSR1P21757 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.11■□□□□ 0.17
MSR1P21757 ATP5G1P1-201ENST00000448724 379 ntBASIC16.11■□□□□ 0.17
MSR1P21757 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.11■□□□□ 0.17
MSR1P21757 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.11■□□□□ 0.17
MSR1P21757 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.11■□□□□ 0.17
MSR1P21757 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.11■□□□□ 0.17
MSR1P21757 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.11■□□□□ 0.17
MSR1P21757 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.11■□□□□ 0.17
MSR1P21757 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
MSR1P21757 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.11■□□□□ 0.17
MSR1P21757 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
MSR1P21757 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
MSR1P21757 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
MSR1P21757 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.11■□□□□ 0.17
MSR1P21757 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.11■□□□□ 0.17
MSR1P21757 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.1■□□□□ 0.17
MSR1P21757 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
MSR1P21757 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.1■□□□□ 0.17
MSR1P21757 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.1■□□□□ 0.17
MSR1P21757 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
MSR1P21757 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
MSR1P21757 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.1■□□□□ 0.17
MSR1P21757 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
MSR1P21757 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.1■□□□□ 0.17
MSR1P21757 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.1■□□□□ 0.17
MSR1P21757 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.1■□□□□ 0.17
MSR1P21757 MIR3917-201ENST00000580971 93 ntBASIC16.1■□□□□ 0.17
MSR1P21757 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
MSR1P21757 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.1■□□□□ 0.17
MSR1P21757 AL138966.2-201ENST00000621997 464 ntBASIC16.1■□□□□ 0.17
MSR1P21757 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms