Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.58■□□□□ 0.72
CD58P19256 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.58■□□□□ 0.72
CD58P19256 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.58■□□□□ 0.72
CD58P19256 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD58P19256 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
CD58P19256 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CD58P19256 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CD58P19256 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD58P19256 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CD58P19256 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CD58P19256 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
CD58P19256 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CD58P19256 LINC01126-201ENST00000623515 1646 ntBASIC19.58■□□□□ 0.72
CD58P19256 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.57■□□□□ 0.72
CD58P19256 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.57■□□□□ 0.72
CD58P19256 AL024508.2-201ENST00000607749 1894 ntBASIC19.57■□□□□ 0.72
CD58P19256 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.57■□□□□ 0.72
CD58P19256 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.57■□□□□ 0.72
CD58P19256 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.57■□□□□ 0.72
CD58P19256 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.57■□□□□ 0.72
CD58P19256 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 LINC01311-201ENST00000565162 1445 ntBASIC19.57■□□□□ 0.72
CD58P19256 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 BICD1-207ENST00000551848 1962 ntBASIC19.57■□□□□ 0.72
CD58P19256 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CD58P19256 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.57■□□□□ 0.72
CD58P19256 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
CD58P19256 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.56■□□□□ 0.72
CD58P19256 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.56■□□□□ 0.72
CD58P19256 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CD58P19256 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CD58P19256 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.56■□□□□ 0.72
CD58P19256 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.56■□□□□ 0.72
CD58P19256 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CD58P19256 AL671277.2-201ENST00000458060 996 ntBASIC19.56■□□□□ 0.72
CD58P19256 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.56■□□□□ 0.72
CD58P19256 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.56■□□□□ 0.72
CD58P19256 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.56■□□□□ 0.72
CD58P19256 HYMAI.1-201ENST00000620949 238 ntBASIC19.56■□□□□ 0.72
CD58P19256 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
CD58P19256 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
CD58P19256 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.56■□□□□ 0.72
CD58P19256 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
CD58P19256 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CD58P19256 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 HBZP1-201ENST00000354915 429 ntBASIC19.55■□□□□ 0.72
CD58P19256 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.55■□□□□ 0.72
CD58P19256 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.55■□□□□ 0.72
CD58P19256 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 MIR1224-201ENST00000408193 85 ntBASIC19.55■□□□□ 0.72
CD58P19256 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.55■□□□□ 0.72
CD58P19256 VENTXP5-201ENST00000523979 775 ntBASIC19.55■□□□□ 0.72
CD58P19256 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.55■□□□□ 0.72
CD58P19256 AC010331.1-201ENST00000611423 582 ntBASIC19.55■□□□□ 0.72
CD58P19256 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CD58P19256 AL590326.2-201ENST00000625139 305 ntBASIC19.55■□□□□ 0.72
CD58P19256 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.55■□□□□ 0.72
CD58P19256 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CD58P19256 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CD58P19256 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CD58P19256 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.54■□□□□ 0.72
CD58P19256 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.54■□□□□ 0.72
CD58P19256 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms