Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRKCAP17252 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.88■□□□□ 0.29
PRKCAP17252 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PRKCAP17252 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
PRKCAP17252 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRKCAP17252 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRKCAP17252 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
PRKCAP17252 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
PRKCAP17252 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCAP17252 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 AC112777.1-201ENST00000540175 1423 ntBASIC16.87■□□□□ 0.29
PRKCAP17252 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.87■□□□□ 0.29
PRKCAP17252 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCAP17252 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
PRKCAP17252 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.87■□□□□ 0.29
PRKCAP17252 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.87■□□□□ 0.29
PRKCAP17252 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCAP17252 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRKCAP17252 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 AC113347.1-201ENST00000413321 391 ntBASIC16.87■□□□□ 0.29
PRKCAP17252 ECEL1P3-201ENST00000427961 737 ntBASIC16.87■□□□□ 0.29
PRKCAP17252 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.87■□□□□ 0.29
PRKCAP17252 AC009947.2-201ENST00000444014 672 ntBASIC16.87■□□□□ 0.29
PRKCAP17252 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.87■□□□□ 0.29
PRKCAP17252 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.87■□□□□ 0.29
PRKCAP17252 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
PRKCAP17252 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRKCAP17252 HOXB1-202ENST00000577092 1414 ntBASIC16.87■□□□□ 0.29
PRKCAP17252 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.86■□□□□ 0.29
PRKCAP17252 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.86■□□□□ 0.29
PRKCAP17252 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.86■□□□□ 0.29
PRKCAP17252 AC010203.1-204ENST00000548782 407 ntBASIC16.86■□□□□ 0.29
PRKCAP17252 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 AL138966.2-201ENST00000621997 464 ntBASIC16.86■□□□□ 0.29
PRKCAP17252 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
PRKCAP17252 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PRKCAP17252 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
PRKCAP17252 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PRKCAP17252 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.86■□□□□ 0.29
PRKCAP17252 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.86■□□□□ 0.29
PRKCAP17252 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PRKCAP17252 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.85■□□□□ 0.29
PRKCAP17252 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PRKCAP17252 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms