Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC31.05■■■□□ 2.56
CFTRP13569 RPL28-205ENST00000558131 444 ntTSL 5 BASIC31.05■■■□□ 2.56
CFTRP13569 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
CFTRP13569 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CFTRP13569 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC31.05■■■□□ 2.56
CFTRP13569 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CFTRP13569 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
CFTRP13569 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CFTRP13569 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CFTRP13569 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CFTRP13569 ADM-208ENST00000534464 1640 ntTSL 2 BASIC31.04■■■□□ 2.56
CFTRP13569 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CFTRP13569 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC31.04■■■□□ 2.56
CFTRP13569 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
CFTRP13569 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CFTRP13569 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CFTRP13569 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CFTRP13569 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC31.03■■■□□ 2.56
CFTRP13569 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CFTRP13569 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC31.03■■■□□ 2.56
CFTRP13569 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC31.03■■■□□ 2.56
CFTRP13569 ARTN-206ENST00000472435 402 ntTSL 3 BASIC31.03■■■□□ 2.56
CFTRP13569 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CFTRP13569 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CFTRP13569 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC31.03■■■□□ 2.56
CFTRP13569 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
CFTRP13569 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
CFTRP13569 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC31.02■■■□□ 2.56
CFTRP13569 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC31.02■■■□□ 2.56
CFTRP13569 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC31.02■■■□□ 2.56
CFTRP13569 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC31.02■■■□□ 2.56
CFTRP13569 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 AC132938.6-201ENST00000623828 1655 ntBASIC31.02■■■□□ 2.56
CFTRP13569 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 GPR89P-201ENST00000407924 1495 ntBASIC31.02■■■□□ 2.56
CFTRP13569 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CFTRP13569 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CFTRP13569 MIR770-201ENST00000390219 98 ntBASIC31.01■■■□□ 2.56
CFTRP13569 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC31.01■■■□□ 2.56
CFTRP13569 COX5A-202ENST00000562233 441 ntTSL 3 BASIC31.01■■■□□ 2.56
CFTRP13569 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CFTRP13569 AC006504.4-201ENST00000592118 1568 ntBASIC31.01■■■□□ 2.56
CFTRP13569 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
CFTRP13569 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFTRP13569 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CFTRP13569 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC31.01■■■□□ 2.55
CFTRP13569 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC31.01■■■□□ 2.55
CFTRP13569 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.55
CFTRP13569 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC31.01■■■□□ 2.55
CFTRP13569 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC31.01■■■□□ 2.55
CFTRP13569 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC31■■■□□ 2.55
CFTRP13569 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFTRP13569 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC31■■■□□ 2.55
CFTRP13569 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CFTRP13569 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFTRP13569 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC31■■■□□ 2.55
CFTRP13569 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFTRP13569 IGHV3-65-201ENST00000523210 341 ntBASIC31■■■□□ 2.55
CFTRP13569 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC31■■■□□ 2.55
CFTRP13569 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC31■■■□□ 2.55
CFTRP13569 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CFTRP13569 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC31■■■□□ 2.55
CFTRP13569 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC31■■■□□ 2.55
CFTRP13569 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CFTRP13569 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CFTRP13569 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CFTRP13569 SNCG-201ENST00000348795 684 ntTSL 2 BASIC30.99■■■□□ 2.55
CFTRP13569 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC30.99■■■□□ 2.55
CFTRP13569 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC30.99■■■□□ 2.55
CFTRP13569 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC30.99■■■□□ 2.55
CFTRP13569 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CFTRP13569 AC092364.2-202ENST00000597012 1073 ntBASIC30.99■■■□□ 2.55
CFTRP13569 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC30.99■■■□□ 2.55
CFTRP13569 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC30.99■■■□□ 2.55
CFTRP13569 AC008667.4-201ENST00000607370 168 ntBASIC30.99■■■□□ 2.55
CFTRP13569 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC30.99■■■□□ 2.55
CFTRP13569 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CFTRP13569 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC30.99■■■□□ 2.55
CFTRP13569 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CFTRP13569 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC30.99■■■□□ 2.55
CFTRP13569 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC30.99■■■□□ 2.55
CFTRP13569 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC30.99■■■□□ 2.55
CFTRP13569 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC30.98■■■□□ 2.55
CFTRP13569 AL032819.2-201ENST00000624543 2162 ntBASIC30.98■■■□□ 2.55
CFTRP13569 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
CFTRP13569 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CFTRP13569 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CFTRP13569 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CFTRP13569 RNF34-208ENST00000555076 593 ntTSL 3 BASIC30.98■■■□□ 2.55
CFTRP13569 PDPK2P-202ENST00000562415 1191 ntBASIC30.98■■■□□ 2.55
CFTRP13569 AL031432.2-201ENST00000566714 459 ntBASIC30.98■■■□□ 2.55
CFTRP13569 AL928711.1-201ENST00000570165 459 ntBASIC30.98■■■□□ 2.55
CFTRP13569 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms