Protein–RNA interactions for Protein: P12645

BMP3, Bone morphogenetic protein 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP3P12645 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
BMP3P12645 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BMP3P12645 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 AKR1C7P-201ENST00000305623 895 ntBASIC20.96■□□□□ 0.95
BMP3P12645 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
BMP3P12645 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.96■□□□□ 0.95
BMP3P12645 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.96■□□□□ 0.95
BMP3P12645 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.96■□□□□ 0.95
BMP3P12645 MIR5100-201ENST00000579544 119 ntBASIC20.96■□□□□ 0.95
BMP3P12645 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.96■□□□□ 0.95
BMP3P12645 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.96■□□□□ 0.95
BMP3P12645 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
BMP3P12645 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
BMP3P12645 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.95■□□□□ 0.94
BMP3P12645 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.95■□□□□ 0.94
BMP3P12645 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.95■□□□□ 0.94
BMP3P12645 AL591684.3-201ENST00000605187 298 ntBASIC20.95■□□□□ 0.94
BMP3P12645 AC114341.1-201ENST00000618070 349 ntBASIC20.95■□□□□ 0.94
BMP3P12645 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
BMP3P12645 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.95■□□□□ 0.94
BMP3P12645 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.95■□□□□ 0.94
BMP3P12645 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.94■□□□□ 0.94
BMP3P12645 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.94■□□□□ 0.94
BMP3P12645 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 AL160237.2-201ENST00000556165 472 ntBASIC20.94■□□□□ 0.94
BMP3P12645 REXO1L6P-202ENST00000619970 1078 ntBASIC20.94■□□□□ 0.94
BMP3P12645 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC20.94■□□□□ 0.94
BMP3P12645 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.94■□□□□ 0.94
BMP3P12645 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
BMP3P12645 TP73-AS1-210ENST00000637775 1455 ntBASIC20.94■□□□□ 0.94
BMP3P12645 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
BMP3P12645 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
BMP3P12645 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
BMP3P12645 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 AC132938.6-201ENST00000623828 1655 ntBASIC20.93■□□□□ 0.94
BMP3P12645 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
BMP3P12645 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.93■□□□□ 0.94
BMP3P12645 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.93■□□□□ 0.94
BMP3P12645 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
BMP3P12645 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
BMP3P12645 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.93■□□□□ 0.94
BMP3P12645 SAPCD2P3-201ENST00000455031 850 ntBASIC20.93■□□□□ 0.94
BMP3P12645 AC009078.2-202ENST00000463353 338 ntBASIC20.93■□□□□ 0.94
BMP3P12645 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.93■□□□□ 0.94
BMP3P12645 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms