Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP2P08253 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP2P08253 MED25-212ENST00000618715 1467 ntTSL 5 BASIC18.33■□□□□ 0.53
MMP2P08253 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.33■□□□□ 0.53
MMP2P08253 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
MMP2P08253 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.33■□□□□ 0.53
MMP2P08253 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP2P08253 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP2P08253 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP2P08253 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
MMP2P08253 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.33■□□□□ 0.53
MMP2P08253 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 IGHGP-201ENST00000390555 1178 ntBASIC18.33■□□□□ 0.52
MMP2P08253 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.33■□□□□ 0.52
MMP2P08253 AC004263.2-201ENST00000617183 678 ntBASIC18.33■□□□□ 0.52
MMP2P08253 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.33■□□□□ 0.52
MMP2P08253 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP2P08253 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
MMP2P08253 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP2P08253 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP2P08253 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP2P08253 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
MMP2P08253 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.33■□□□□ 0.52
MMP2P08253 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.33■□□□□ 0.52
MMP2P08253 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
MMP2P08253 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
MMP2P08253 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP2P08253 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP2P08253 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
MMP2P08253 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP2P08253 AP003733.1-201ENST00000491725 852 ntBASIC18.32■□□□□ 0.52
MMP2P08253 CLN6-204ENST00000564752 900 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP2P08253 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP2P08253 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP2P08253 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.32■□□□□ 0.52
MMP2P08253 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
MMP2P08253 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.32■□□□□ 0.52
MMP2P08253 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
MMP2P08253 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.32■□□□□ 0.52
MMP2P08253 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.31■□□□□ 0.52
MMP2P08253 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MMP2P08253 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
MMP2P08253 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
MMP2P08253 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP2P08253 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP2P08253 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MMP2P08253 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP2P08253 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.31■□□□□ 0.52
MMP2P08253 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.31■□□□□ 0.52
MMP2P08253 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP2P08253 AL136038.3-201ENST00000561909 1096 ntBASIC18.31■□□□□ 0.52
MMP2P08253 AL590326.2-201ENST00000625139 305 ntBASIC18.31■□□□□ 0.52
MMP2P08253 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
MMP2P08253 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.31■□□□□ 0.52
MMP2P08253 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
MMP2P08253 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
MMP2P08253 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC18.31■□□□□ 0.52
MMP2P08253 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms