Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.28■□□□□ 0.04
GAPDHP04406 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.28■□□□□ 0.04
GAPDHP04406 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GAPDHP04406 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.28■□□□□ 0.04
GAPDHP04406 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15.28■□□□□ 0.04
GAPDHP04406 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
GAPDHP04406 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.28■□□□□ 0.04
GAPDHP04406 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
GAPDHP04406 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.28■□□□□ 0.04
GAPDHP04406 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAPDHP04406 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.27■□□□□ 0.04
GAPDHP04406 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC15.27■□□□□ 0.04
GAPDHP04406 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GAPDHP04406 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.27■□□□□ 0.04
GAPDHP04406 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC15.27■□□□□ 0.04
GAPDHP04406 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.27■□□□□ 0.04
GAPDHP04406 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.27■□□□□ 0.04
GAPDHP04406 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAPDHP04406 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC15.27■□□□□ 0.04
GAPDHP04406 AL355075.4-201ENST00000554988 638 ntBASIC15.27■□□□□ 0.04
GAPDHP04406 FITM1-202ENST00000559294 800 ntBASIC15.27■□□□□ 0.04
GAPDHP04406 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GAPDHP04406 AP000525.1-201ENST00000608286 694 ntBASIC15.27■□□□□ 0.04
GAPDHP04406 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GAPDHP04406 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAPDHP04406 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
GAPDHP04406 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GAPDHP04406 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
GAPDHP04406 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
GAPDHP04406 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
GAPDHP04406 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAPDHP04406 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
GAPDHP04406 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
GAPDHP04406 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAPDHP04406 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAPDHP04406 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
GAPDHP04406 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.26■□□□□ 0.03
GAPDHP04406 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
GAPDHP04406 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC15.26■□□□□ 0.03
GAPDHP04406 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC15.26■□□□□ 0.03
GAPDHP04406 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 MIR1238-201ENST00000408483 83 ntBASIC15.26■□□□□ 0.03
GAPDHP04406 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC15.26■□□□□ 0.03
GAPDHP04406 C2orf69P3-201ENST00000565542 1120 ntBASIC15.26■□□□□ 0.03
GAPDHP04406 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.26■□□□□ 0.03
GAPDHP04406 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.26■□□□□ 0.03
GAPDHP04406 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAPDHP04406 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms