Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NDUFS3O75489 NOC2LP1-202ENST00000452600 2235 ntBASIC18.19■□□□□ 0.5
NDUFS3O75489 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
NDUFS3O75489 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.19■□□□□ 0.5
NDUFS3O75489 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.19■□□□□ 0.5
NDUFS3O75489 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.19■□□□□ 0.5
NDUFS3O75489 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
NDUFS3O75489 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 AC005363.2-201ENST00000618631 242 ntBASIC18.19■□□□□ 0.5
NDUFS3O75489 AL138966.2-201ENST00000621997 464 ntBASIC18.19■□□□□ 0.5
NDUFS3O75489 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.19■□□□□ 0.5
NDUFS3O75489 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NDUFS3O75489 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NDUFS3O75489 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFS3O75489 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFS3O75489 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.18■□□□□ 0.5
NDUFS3O75489 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NDUFS3O75489 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NDUFS3O75489 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 PHGDH-209ENST00000641074 1780 ntBASIC18.18■□□□□ 0.5
NDUFS3O75489 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.18■□□□□ 0.5
NDUFS3O75489 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.18■□□□□ 0.5
NDUFS3O75489 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.18■□□□□ 0.5
NDUFS3O75489 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
NDUFS3O75489 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NDUFS3O75489 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 MIR3917-201ENST00000580971 93 ntBASIC18.18■□□□□ 0.5
NDUFS3O75489 AC140113.3-201ENST00000605663 199 ntBASIC18.18■□□□□ 0.5
NDUFS3O75489 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
NDUFS3O75489 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NDUFS3O75489 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.18■□□□□ 0.5
NDUFS3O75489 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.17■□□□□ 0.5
NDUFS3O75489 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NDUFS3O75489 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 AL096828.2-201ENST00000567259 1965 ntBASIC18.17■□□□□ 0.5
NDUFS3O75489 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
NDUFS3O75489 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
NDUFS3O75489 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NDUFS3O75489 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.17■□□□□ 0.5
NDUFS3O75489 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 AC010203.1-204ENST00000548782 407 ntBASIC18.17■□□□□ 0.5
NDUFS3O75489 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.17■□□□□ 0.5
NDUFS3O75489 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 AC097493.4-201ENST00000641197 219 ntBASIC18.17■□□□□ 0.5
NDUFS3O75489 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NDUFS3O75489 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.17■□□□□ 0.5
NDUFS3O75489 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.17■□□□□ 0.5
NDUFS3O75489 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NDUFS3O75489 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NDUFS3O75489 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NDUFS3O75489 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.16■□□□□ 0.5
NDUFS3O75489 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.16■□□□□ 0.5
NDUFS3O75489 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.16■□□□□ 0.5
NDUFS3O75489 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.16■□□□□ 0.5
NDUFS3O75489 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NDUFS3O75489 AL137013.1-201ENST00000432946 1228 ntBASIC18.16■□□□□ 0.5
NDUFS3O75489 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms