Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
ZIC3O60481 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
ZIC3O60481 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 PPIH-202ENST00000372549 327 ntTSL 3 BASIC16.36■□□□□ 0.21
ZIC3O60481 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.36■□□□□ 0.21
ZIC3O60481 HCG4P8-203ENST00000443049 980 ntBASIC16.36■□□□□ 0.21
ZIC3O60481 AC068472.1-201ENST00000474589 881 ntBASIC16.36■□□□□ 0.21
ZIC3O60481 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.36■□□□□ 0.21
ZIC3O60481 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
ZIC3O60481 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
ZIC3O60481 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.36■□□□□ 0.21
ZIC3O60481 AC009154.2-201ENST00000621177 724 ntBASIC16.36■□□□□ 0.21
ZIC3O60481 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.36■□□□□ 0.21
ZIC3O60481 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.36■□□□□ 0.21
ZIC3O60481 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
ZIC3O60481 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
ZIC3O60481 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.36■□□□□ 0.21
ZIC3O60481 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.35■□□□□ 0.21
ZIC3O60481 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
ZIC3O60481 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
ZIC3O60481 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 AL096828.2-201ENST00000567259 1965 ntBASIC16.35■□□□□ 0.21
ZIC3O60481 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.35■□□□□ 0.21
ZIC3O60481 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.35■□□□□ 0.21
ZIC3O60481 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.35■□□□□ 0.21
ZIC3O60481 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 KRT18P65-201ENST00000439811 1286 ntBASIC16.35■□□□□ 0.21
ZIC3O60481 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.35■□□□□ 0.21
ZIC3O60481 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.35■□□□□ 0.21
ZIC3O60481 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.35■□□□□ 0.21
ZIC3O60481 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.35■□□□□ 0.21
ZIC3O60481 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
ZIC3O60481 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.34■□□□□ 0.21
ZIC3O60481 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
ZIC3O60481 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 AL845331.1-201ENST00000424978 1190 ntBASIC16.34■□□□□ 0.21
ZIC3O60481 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ZIC3O60481 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.34■□□□□ 0.21
ZIC3O60481 KRT18P56-201ENST00000507275 550 ntBASIC16.34■□□□□ 0.21
ZIC3O60481 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.34■□□□□ 0.21
ZIC3O60481 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.34■□□□□ 0.21
ZIC3O60481 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.34■□□□□ 0.21
ZIC3O60481 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.34■□□□□ 0.21
ZIC3O60481 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ZIC3O60481 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms