Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
URB1O60287 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
URB1O60287 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.19■□□□□ 0.34
URB1O60287 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.19■□□□□ 0.34
URB1O60287 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 CFL1-202ENST00000524553 860 ntTSL 2 BASIC17.19■□□□□ 0.34
URB1O60287 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.19■□□□□ 0.34
URB1O60287 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.19■□□□□ 0.34
URB1O60287 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.19■□□□□ 0.34
URB1O60287 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
URB1O60287 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
URB1O60287 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.19■□□□□ 0.34
URB1O60287 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
URB1O60287 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
URB1O60287 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
URB1O60287 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
URB1O60287 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 AC006333.2-201ENST00000607957 2099 ntBASIC17.18■□□□□ 0.34
URB1O60287 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
URB1O60287 OR7E14P-202ENST00000530490 1290 ntBASIC17.18■□□□□ 0.34
URB1O60287 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.18■□□□□ 0.34
URB1O60287 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.18■□□□□ 0.34
URB1O60287 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.18■□□□□ 0.34
URB1O60287 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.18■□□□□ 0.34
URB1O60287 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC17.18■□□□□ 0.34
URB1O60287 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC17.18■□□□□ 0.34
URB1O60287 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.18■□□□□ 0.34
URB1O60287 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.18■□□□□ 0.34
URB1O60287 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.18■□□□□ 0.34
URB1O60287 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.18■□□□□ 0.34
URB1O60287 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
URB1O60287 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 RCN1P2-201ENST00000398357 915 ntBASIC17.17■□□□□ 0.34
URB1O60287 AC007967.2-201ENST00000432613 625 ntBASIC17.17■□□□□ 0.34
URB1O60287 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.17■□□□□ 0.34
URB1O60287 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.17■□□□□ 0.34
URB1O60287 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.17■□□□□ 0.34
URB1O60287 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.17■□□□□ 0.34
URB1O60287 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.17■□□□□ 0.34
URB1O60287 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC17.17■□□□□ 0.34
URB1O60287 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
URB1O60287 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.17■□□□□ 0.34
URB1O60287 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
URB1O60287 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
URB1O60287 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.16■□□□□ 0.34
URB1O60287 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.16■□□□□ 0.34
URB1O60287 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.16■□□□□ 0.34
URB1O60287 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
URB1O60287 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.16■□□□□ 0.34
URB1O60287 TP73-AS1-210ENST00000637775 1455 ntBASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms