Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD2O14647 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD2O14647 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD2O14647 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD2O14647 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD2O14647 SLC4A1APP2-201ENST00000424054 1259 ntBASIC25.2■■□□□ 1.62
CHD2O14647 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHD2O14647 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD2O14647 AC122714.2-201ENST00000502787 707 ntBASIC25.2■■□□□ 1.62
CHD2O14647 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC25.2■■□□□ 1.62
CHD2O14647 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
CHD2O14647 RIN3-211ENST00000557762 517 ntTSL 3 BASIC25.2■■□□□ 1.62
CHD2O14647 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC25.2■■□□□ 1.62
CHD2O14647 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC25.2■■□□□ 1.62
CHD2O14647 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC25.2■■□□□ 1.62
CHD2O14647 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHD2O14647 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHD2O14647 AC148477.5-201ENST00000625164 1645 ntBASIC25.2■■□□□ 1.62
CHD2O14647 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC25.2■■□□□ 1.62
CHD2O14647 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.2■■□□□ 1.62
CHD2O14647 NCF1C-201ENST00000438382 1427 ntBASIC25.2■■□□□ 1.62
CHD2O14647 AC004817.3-201ENST00000602957 2129 ntBASIC25.2■■□□□ 1.62
CHD2O14647 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC25.2■■□□□ 1.62
CHD2O14647 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHD2O14647 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
CHD2O14647 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD2O14647 WDR53-203ENST00000429115 683 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD2O14647 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD2O14647 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD2O14647 AC092364.2-202ENST00000597012 1073 ntBASIC25.19■■□□□ 1.62
CHD2O14647 AC106028.4-201ENST00000614509 607 ntBASIC25.19■■□□□ 1.62
CHD2O14647 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
CHD2O14647 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD2O14647 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC25.19■■□□□ 1.62
CHD2O14647 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CHD2O14647 KRT8P47-201ENST00000604727 1398 ntBASIC25.19■■□□□ 1.62
CHD2O14647 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 COX5A-202ENST00000562233 441 ntTSL 3 BASIC25.19■■□□□ 1.62
CHD2O14647 AL096865.1-201ENST00000606796 927 ntBASIC25.19■■□□□ 1.62
CHD2O14647 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC25.19■■□□□ 1.62
CHD2O14647 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.19■■□□□ 1.62
CHD2O14647 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CHD2O14647 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
CHD2O14647 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC25.18■■□□□ 1.62
CHD2O14647 AC006504.4-201ENST00000592118 1568 ntBASIC25.18■■□□□ 1.62
CHD2O14647 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD2O14647 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
CHD2O14647 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD2O14647 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD2O14647 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD2O14647 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CHD2O14647 CD9-202ENST00000382515 1229 ntTSL 5 BASIC25.18■■□□□ 1.62
CHD2O14647 SPDYE21P-201ENST00000413323 827 ntBASIC25.18■■□□□ 1.62
CHD2O14647 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CHD2O14647 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CHD2O14647 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC25.18■■□□□ 1.62
CHD2O14647 PDPK2P-202ENST00000562415 1191 ntBASIC25.18■■□□□ 1.62
CHD2O14647 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC25.18■■□□□ 1.62
CHD2O14647 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC25.18■■□□□ 1.62
CHD2O14647 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC25.18■■□□□ 1.62
CHD2O14647 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
CHD2O14647 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC25.18■■□□□ 1.62
CHD2O14647 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC25.17■■□□□ 1.62
CHD2O14647 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD2O14647 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD2O14647 ARTN-206ENST00000472435 402 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD2O14647 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD2O14647 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD2O14647 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC25.17■■□□□ 1.62
CHD2O14647 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHD2O14647 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD2O14647 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC25.17■■□□□ 1.62
CHD2O14647 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
CHD2O14647 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC25.16■■□□□ 1.62
CHD2O14647 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC25.16■■□□□ 1.62
CHD2O14647 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC25.16■■□□□ 1.62
CHD2O14647 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC25.16■■□□□ 1.62
CHD2O14647 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
CHD2O14647 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.16■■□□□ 1.62
CHD2O14647 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC25.16■■□□□ 1.62
CHD2O14647 PRSS29P-201ENST00000440800 595 ntBASIC25.16■■□□□ 1.62
CHD2O14647 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CHD2O14647 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC25.16■■□□□ 1.62
CHD2O14647 AL031432.2-201ENST00000566714 459 ntBASIC25.16■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms