Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AL161938.1-201ENST00000569833 2180 ntBASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AL645608.8-201ENST00000606034 2086 ntBASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 AC134043.2-201ENST00000624206 2238 ntBASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 SPTB-202ENST00000389720 6321 ntTSL 5 BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
CHKB-CPT1BH3BT56 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 GTF2IP13-202ENST00000609439 10247 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 MECOM-206ENST00000464456 5732 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 PXK-206ENST00000463280 2825 ntTSL 2 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 MOK-225ENST00000522867 1883 ntTSL 5 BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
CHKB-CPT1BH3BT56 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms