Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 KRT18P23-201ENST00000435622 1283 ntBASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC104390.1-201ENST00000555663 520 ntBASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 MIR3180-4-201ENST00000582223 153 ntBASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 AL121772.3-201ENST00000610840 674 ntBASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC079602.3-201ENST00000623931 403 ntBASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TMX2-CTNND1H3BSU7 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 AP002383.4-201ENST00000442518 975 ntBASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 AL354751.1-201ENST00000412768 1863 ntBASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TMX2-CTNND1H3BSU7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 DRAXINP1-201ENST00000437611 948 ntBASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC090616.6-201ENST00000582640 721 ntBASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TMX2-CTNND1H3BSU7 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 KRT17P6-201ENST00000453795 1220 ntBASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC010240.3-201ENST00000607688 395 ntBASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TMX2-CTNND1H3BSU7 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms