Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 AL391807.1-203ENST00000604392 2365 ntBASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 SPDYE13P-201ENST00000445314 798 ntBASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 AC138932.1-201ENST00000534164 6830 ntBASIC18.51■□□□□ 0.55
PCDHB9Q9Y5E1 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHB9Q9Y5E1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 AP000347.1-202ENST00000435868 847 ntBASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 AC016734.2-201ENST00000624325 1377 ntBASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHB9Q9Y5E1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 HLA-F-220ENST00000434407 884 ntBASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 NUS1P1-201ENST00000446295 882 ntBASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 UNC93B7-201ENST00000509439 705 ntBASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHB9Q9Y5E1 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms