Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.11■□□□□ 0.33
IFT52Q9Y366 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT52Q9Y366 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.11■□□□□ 0.33
IFT52Q9Y366 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT52Q9Y366 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.11■□□□□ 0.33
IFT52Q9Y366 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IFT52Q9Y366 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IFT52Q9Y366 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
IFT52Q9Y366 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.11■□□□□ 0.33
IFT52Q9Y366 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT52Q9Y366 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IFT52Q9Y366 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 ESPNP-201ENST00000270691 2015 ntBASIC17.1■□□□□ 0.33
IFT52Q9Y366 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 UNC93B2-201ENST00000285383 730 ntBASIC17.1■□□□□ 0.33
IFT52Q9Y366 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 Z99916.2-201ENST00000604037 246 ntBASIC17.1■□□□□ 0.33
IFT52Q9Y366 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IFT52Q9Y366 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.1■□□□□ 0.33
IFT52Q9Y366 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 AP003071.4-201ENST00000562276 1284 ntBASIC17.09■□□□□ 0.33
IFT52Q9Y366 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IFT52Q9Y366 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 AC135776.1-201ENST00000319817 2481 ntBASIC17.09■□□□□ 0.33
IFT52Q9Y366 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IFT52Q9Y366 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
IFT52Q9Y366 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
IFT52Q9Y366 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFT52Q9Y366 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IFT52Q9Y366 AC093677.2-201ENST00000600169 1863 ntBASIC17.08■□□□□ 0.33
IFT52Q9Y366 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.08■□□□□ 0.33
IFT52Q9Y366 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IFT52Q9Y366 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 SLC25A1P2-201ENST00000430693 912 ntBASIC17.08■□□□□ 0.32
IFT52Q9Y366 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.08■□□□□ 0.32
IFT52Q9Y366 TSPY17P-201ENST00000450329 467 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms