Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 AC068587.9-201ENST00000641814 219 ntBASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.01■■□□□ 1.11
ZC3H4Q9UPT8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 AL163051.1-201ENST00000569214 1512 ntBASIC22■■□□□ 1.11
ZC3H4Q9UPT8 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22■■□□□ 1.11
ZC3H4Q9UPT8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 ELL2P1-201ENST00000413990 1906 ntBASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC21.99■■□□□ 1.11
ZC3H4Q9UPT8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 AC073314.1-201ENST00000568729 2216 ntBASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 KRT18P2-201ENST00000447938 1258 ntBASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 AP000867.4-201ENST00000641616 219 ntBASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
ZC3H4Q9UPT8 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 FEM1AP3-201ENST00000403722 1741 ntBASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 METTL26-205ENST00000397666 726 ntTSL 2 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
ZC3H4Q9UPT8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms