Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 AC034236.2-201ENST00000606662 1610 ntBASIC16.29■□□□□ 0.2
COPS3Q9UNS2 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COPS3Q9UNS2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.28■□□□□ 0.2
COPS3Q9UNS2 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
COPS3Q9UNS2 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 AL359736.2-201ENST00000621992 437 ntBASIC16.27■□□□□ 0.2
COPS3Q9UNS2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
COPS3Q9UNS2 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COPS3Q9UNS2 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 MFAP1P1-201ENST00000442257 1255 ntBASIC16.26■□□□□ 0.19
COPS3Q9UNS2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 CD99P1-205ENST00000527459 561 ntBASIC16.26■□□□□ 0.19
COPS3Q9UNS2 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COPS3Q9UNS2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms