Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 AC112777.1-201ENST00000540175 1423 ntBASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 LINC01311-201ENST00000565162 1445 ntBASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CNOT6Q9ULM6 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 HLA-F-220ENST00000434407 884 ntBASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 AL121956.5-201ENST00000625261 221 ntBASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 MYLKP1-201ENST00000509077 1580 ntBASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.29■□□□□ 0.52
CNOT6Q9ULM6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 AL391807.1-203ENST00000604392 2365 ntBASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 AC068880.1-201ENST00000507289 2297 ntBASIC18.28■□□□□ 0.52
CNOT6Q9ULM6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 ZNF444P1-201ENST00000559497 298 ntBASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CNOT6Q9ULM6 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.27■□□□□ 0.51
CNOT6Q9ULM6 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CNOT6Q9ULM6 AC020916.1-201ENST00000587762 1774 ntBASIC18.27■□□□□ 0.51
CNOT6Q9ULM6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT6Q9ULM6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CNOT6Q9ULM6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms