Protein–RNA interactions for Protein: Q9UKN8

GTF3C4, General transcription factor 3C polypeptide 4, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4Q9UKN8 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
GTF3C4Q9UKN8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 AL136038.4-201ENST00000603606 1261 ntBASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
GTF3C4Q9UKN8 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF3C4Q9UKN8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.64■□□□□ 0.74
GTF3C4Q9UKN8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
GTF3C4Q9UKN8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF3C4Q9UKN8 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.64■□□□□ 0.74
GTF3C4Q9UKN8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
GTF3C4Q9UKN8 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 AP000593.1-201ENST00000393668 712 ntBASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 HLA-F-220ENST00000434407 884 ntBASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.64■□□□□ 0.73
GTF3C4Q9UKN8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 AC099343.3-201ENST00000605834 2503 ntBASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 AC135776.1-201ENST00000319817 2481 ntBASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 NOC2LP2-201ENST00000407594 1944 ntBASIC19.63■□□□□ 0.73
GTF3C4Q9UKN8 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 MIR3180-4-201ENST00000582223 153 ntBASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
GTF3C4Q9UKN8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms