Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.62■□□□□ 0.89
HDAC6Q9UBN7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 FP475955.4-201ENST00000623131 1990 ntBASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 TSPY19P-201ENST00000418461 509 ntBASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 TSPY18P-201ENST00000441642 509 ntBASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HDAC6Q9UBN7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 AL390719.2-201ENST00000606993 987 ntBASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HDAC6Q9UBN7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 FAAHP1-202ENST00000446499 1238 ntBASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 KRT17P6-201ENST00000453795 1220 ntBASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 EMBP1-201ENST00000458200 901 ntBASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HDAC6Q9UBN7 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms