Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 AC007322.1-201ENST00000426983 750 ntBASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 PARP1-210ENST00000629232 477 ntTSL 5 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
COMMD3Q9UBI1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 AC231657.2-201ENST00000624556 255 ntBASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
COMMD3Q9UBI1 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 AC016769.1-201ENST00000409132 1010 ntBASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
COMMD3Q9UBI1 AL121761.2-201ENST00000598007 1648 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms