Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC11.93□□□□□ -0.5
LINC00474Q9P2X8 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 CYP2D8P-201ENST00000433633 1490 ntBASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 KRT18P41-201ENST00000518924 1277 ntBASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 AC008687.5-201ENST00000593746 558 ntBASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 AC097493.4-201ENST00000641197 219 ntBASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 HOXB1-202ENST00000577092 1414 ntBASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
LINC00474Q9P2X8 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 AC018470.1-201ENST00000624790 3129 ntBASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 TBC1D3P2-202ENST00000577902 1649 ntBASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 PRR31-201ENST00000371629 978 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 GAD2-202ENST00000376248 680 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
LINC00474Q9P2X8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms