Protein–RNA interactions for Protein: Q9NWD8

TMEM248, Transmembrane protein 248, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248Q9NWD8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 LINC00602-201ENST00000629776 2065 ntBASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 AC135050.7-201ENST00000624508 2218 ntBASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TMEM248Q9NWD8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 KRT8P26-201ENST00000534154 1276 ntBASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 ABALON-201ENST00000629058 1903 ntBASIC18.61■□□□□ 0.57
TMEM248Q9NWD8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 AL354751.1-201ENST00000412768 1863 ntBASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TMEM248Q9NWD8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 AL121672.3-201ENST00000608644 468 ntBASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.59■□□□□ 0.57
TMEM248Q9NWD8 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms